MXM - Feature Selection (Including Multiple Solutions) and Bayesian
Networks
Many feature selection methods for a wide range of
response variables, including minimal, statistically-equivalent
and equally-predictive feature subsets. Bayesian network
algorithms and related functions are also included. The package
name 'MXM' stands for "Mens eX Machina", meaning "Mind from the
Machine" in Latin. References: a) Lagani, V. and Athineou, G.
and Farcomeni, A. and Tsagris, M. and Tsamardinos, I. (2017).
"Feature Selection with the R Package MXM: Discovering
Statistically Equivalent Feature Subsets". Journal of
Statistical Software, 80(7). <doi:10.18637/jss.v080.i07>. b)
Tsagris, M., Lagani, V. and Tsamardinos, I. (2018). "Feature
selection for high-dimensional temporal data". BMC
Bioinformatics, 19:17. <doi:10.1186/s12859-018-2023-7>. c)
Tsagris, M., Borboudakis, G., Lagani, V. and Tsamardinos, I.
(2018). "Constraint-based causal discovery with mixed data".
International Journal of Data Science and Analytics, 6(1):
19-30. <doi:10.1007/s41060-018-0097-y>. d) Tsagris, M.,
Papadovasilakis, Z., Lakiotaki, K. and Tsamardinos, I. (2018).
"Efficient feature selection on gene expression data: Which
algorithm to use?" BioRxiv. <doi:10.1101/431734>. e) Tsagris,
M. (2019). "Bayesian Network Learning with the PC Algorithm: An
Improved and Correct Variation". Applied Artificial
Intelligence, 33(2):101-123.
<doi:10.1080/08839514.2018.1526760>. f) Tsagris, M. and
Tsamardinos, I. (2019). "Feature selection with the R package
MXM". F1000Research 7: 1505.
<doi:10.12688/f1000research.16216.2>. g) Borboudakis, G. and
Tsamardinos, I. (2019). "Forward-Backward Selection with Early
Dropping". Journal of Machine Learning Research 20: 1-39. h)
Tsagris, M., Papadovasilakis, Z., Lakiotaki, K. and
Tsamardinos, I. (2022). "The gamma-OMP algorithm for feature
selection with application to gene expression data". IEEE/ACM
Transactions on Computational Biology and Bioinformatics 19(2):
1214-1224. <doi:10.1109/TCBB.2020.3029952>.